WorkflowResearch & Discovery

Target Dossier Builder

A graded, cited target assessment dossier for any target and indication, built by agents and signed by your therapeutic-area lead

A graded, cited assessment of any target in about five days, with weak evidence challenged before anyone signs.

See one case, screen by screen ↓
target5.1daysmedian from request to a signed dossier
demo142claimsin the RKN2 dossier, from 61 sources, each one linked to its source passage
demo7challengesraised by the critic on RKN2 — 5 resolved by the agents and owners before review
target65%of the critic’s challenges accepted by reviewers before signing
The problem

Why a target assessment takes a month

A target and an indication sound like one question. They are six: does human genetics link the target to the disease and in which direction, is it in the cells that drive the disease, is there functional proof, can the planned modality reach it, what happens when it is taken away, and who else is on it. Each answer lives somewhere different — genome-wide studies and target–disease portals, single-cell atlases and internal omics, screening and chemistry reports, variant databases, competitor pipelines, patent families.

So the work is mostly gathering and writing. A computational biologist, a chemist, a safety scientist and competitive intelligence each assemble their part, in their own format, with their own idea of what “strong” means. The dossier that reaches the portfolio committee is weeks old, graded unevenly, and hard to check: an RNA-only expression signal reads the same as confirmed protein, and a single-laboratory finding reads the same as a replicated one.

typical≈4weeksto assess one target by hand
demo6criteriaevery dossier must answer — each from different sources and different people
Where a target dossier’s days goestimated
By hand20 days
With the solution5.1 days
  • Planning the questions and who answers them1 → 0.1 d
  • Human genetics and expression evidence5 → 1 d
  • Pathway biology, tractability and safety6 → 1.5 d
  • Competitor pipeline and patent landscape3 → 0.5 d
  • Grading and writing the dossier3 → 0.5 d
  • Scientific review and sign-off2 → 1.5 d

Estimated split for one target and indication, in working days, by hand and with the solution.

How it works

How a target moves

Nine agents plan, research six questions in parallel, challenge the evidence and assemble the dossier; the therapeutic-area lead signs.

What comes in
Request inTarget + disease · one line to start
Agents at work
Dossier planner≈ 40 questions
Then
Genetics evidence agent
Expression agent
Pathway biology agent
Tractability agent
Safety liability agent
Competition & IP agent
Then
Criticchallenges
Then
Dossier assemblergraded dossier
A person decides
Therapeutic-area leaddecides and signs
What comes out
Signed dossier
Scorecard
Open questions
One case, step by step

Two targets, from one line to a signed dossier

The discovery portfolio committee meets on Oct 22. Dr. Maya Chen, head of Immunology target discovery, has a new request to start and the RKN2 dossier in ulcerative colitis to sign. Here is her morning, screen by screen, in the working solution.

  1. 01Morning

    The portfolio, graded on one screen

    Dr. Maya Chen · Head of Immunology target discovery

    Twelve targets across Immunology, Oncology and Neuroscience on one evidence matrix, graded A to D on genetics, expression, biology, tractability, safety and competition. Four items wait for her: RKN2 in ulcerative colitis ready for sign-off, a challenge to decide on IL1RL4, a new request from Sam Patel, and a change the weekly refresh found on GPR214.

    “GPR214 — the weekly refresh found a change. A third competitor entered Phase 1 on Oct 3 — Competition may change.”

  2. 02One line

    “PTPN31 in atopic dermatitis” — and the build starts

    Dr. Maya Chen · Head of Immunology target discovery

    Sam Patel’s request names the target, the indication and the modality: small molecule or degrader. Maya types it into the bar and presses Build dossier. The dossier planner splits the template into 6 sections and 38 research questions, and six specialist agents start in parallel, one on each section.

    Each lane shows what its agent is working on as it runs — “Off-tissue expression…”, “Modality fit…”, “Congress abstracts…”.

  3. 03Built

    Graded, challenged and routed for review

    The agents

    Grades land as each agent finishes: genetics B, expression A, biology B, tractability C, safety B, competition A. The critic raised 6 challenges; the agents resolved 5 and left 1 for the owner. The assembler wrote 128 claims from 54 sources into the dossier — overall B+ — and routed it to Dr. Maya Chen.

    The one challenge left: “Tractability rests on a predicted pocket with no ligand.” Proposed: keep C and add a fragment screen as an open question.

  4. 04Ready for sign-off

    RKN2 in ulcerative colitis, section by section

    Dr. Maya Chen · Head of Immunology target discovery

    The RKN2 dossier came in at overall B+ with the recommendation “Advance to validation with conditions”: 61 sources, 142 claims, built in 4.6 days. Genetics is A — a protective missense variant, p.Arg412Gln, lowers ulcerative colitis risk with an odds ratio of 0.71 (p = 3.1 × 10⁻¹⁹, 59,957 cases), and fine-mapping gives it a posterior of 0.86. Loss of function protects, so inhibition is the right direction.

    “Built by 9 agents in 38 minutes of agent time. Every claim links to its source passage.”

  5. 05Section 5 of 6

    What happens when the target is taken away

    Safety liability agent

    Safety is graded C, at 81 % agent confidence. 212 heterozygous loss-of-function carriers show no immune deficiency or serious infection across 1,400 phenotypes. But two siblings with homozygous partial loss of function had chronic mucocutaneous candidiasis from early childhood, and knock-in mice clear oral Candida more slowly. Infection risk needs a monitoring plan.

    The critic, on safety: “Candidiasis is a known, monitorable effect of IL-17 pathway medicines … the risk looks dose-dependent.” Proposed: consider raising Safety from C to B, with a fungal-infection monitoring condition.

  6. 06One click

    The source passage, not a summary of it

    Dr. Maya Chen · Head of Immunology target discovery

    Maya clicks the citation on the case report. The passage opens with the sentence the claim rests on highlighted — Clinical Immunogenetics Reports, 2023. Every claim in the dossier opens the same way, at the passage it came from.

    “Two siblings homozygous for a partial loss-of-function RKN2 variant presented with chronic mucocutaneous candidiasis from early childhood; no other infections were reported.”

  7. 07Section 2 of 6

    Weak evidence, challenged before anyone signs

    Critic

    On expression, RNA places RKN2 in Th17 cells, ILC3 and γδ T cells and 2.4-fold higher in inflamed mucosa — but there is no protein data yet. The critic will not let that pass as an A. Maya can accept, keep as is, or ask the agent to look again.

    “Expression rests on RNA only. A grade of A needs protein in the diseased tissue.” Proposed: keep B and add an open question — confirm RKN2 protein in UC biopsies by immunostaining.

  8. 08Accepted

    The gap becomes a named open question

    Dr. Maya Chen · Head of Immunology target discovery

    She accepts. Expression stays B, and the open question goes to Sam Patel, due Nov 14. It joins the others, each with an owner and a date: cellular selectivity against RKN1 in human cardiomyocytes for Priya Raman, a freedom-to-operate opinion on the allosteric pocket for Omar Haddad, serum IL-22 as a pharmacodynamic biomarker for Sam Patel.

    “Accepted · open question added for Sam Patel.”

  9. 09Sign-off

    Advance with conditions — the open questions are the conditions

    Dr. Maya Chen · Head of Immunology target discovery

    Four choices: advance to validation, advance with conditions, hold for more evidence, or stop. The conditions are filled from the open questions. The safety challenge is still open, so it is recorded with her signature, and because safety is graded C, Lena Ortiz co-signs after her. Maya signs with her password; the meaning is recorded with it.

    “Signing as Dr. Maya Chen · Meaning: scientific approval of this dossier · Oct 7, 2026.”

  10. 10Signed · Oct 7

    Co-signed, and on the record for the committee

    Lena Ortiz · Translational safety scientist

    Lena Ortiz co-signs the safety grade C, and RKN2 goes into the Oct 22 committee pack. The review record shows every step since Sam Patel’s request on Sep 30 — the planner’s 41 questions, each agent’s grade, the critic’s 7 challenges, the refreshed competitor extract — people and agents, newest first.

Who it’s for

Built for everyone who carries a target to committee.

The same dossier, seen by the five people who build, check and decide on it — what their week looked like, and what it looks like now.

MC
Dr. Maya ChenHead of Immunology target discovery
Therapeutic-area lead
Before
Signs dossiers whose sections were graded by different people to different bars, and checks the evidence by asking for it.
Now
Reads one graded dossier per target, opens any claim at its source passage, decides the critic’s challenges and signs.
SP
Sam PatelComputational biologist
Scientist
Before
Spends the first weeks of every request pulling genome-wide studies, fine-mapping and single-cell data together by hand.
Now
Requests a target in one line and gets back graded sections, plus the open questions that are his to answer.
LO
Lena OrtizTranslational safety scientist
Safety scientist
Before
Finds out about a safety liability when the dossier is already in front of the committee.
Now
Co-signs every safety grade of C or D, with the carrier data, knockout phenotypes and case reports cited in the section.
OH
Omar HaddadCompetitive intelligence lead
Scientist
Before
Re-runs competitor searches by hand whenever a dossier is about to be reviewed.
Now
Competitor data older than 30 days is refreshed before review, and the weekly refresh flags a new entrant on signed targets.
DO
Dana OkaforPortfolio committee secretary
Committee secretary
Before
Builds the committee pack from dossiers in different formats that are hard to put side by side.
Now
Compares up to four targets on the same six criteria and the same rubric, and adds them to the committee pack.
Built on the engine

9 agents. Each with one job, and hard limits.

Nine agents plan, research six questions in parallel, challenge the evidence and assemble the dossier; the therapeutic-area lead signs.

Dossier planner

Splits a target request into the template sections and 35–45 research questions, assigns each to a specialist agent and sets the evidence bar for every grade.

  • Every template section is planned
  • Never grades a section
  • The modality must be stated before planning
Genetics evidence agent

Finds genome-wide and rare-variant evidence, fine-mapping and colocalisation, with effect size, p-value and cohort size, and states the direction of effect for every claim.

  • Direction of effect stated for every genetic claim
  • Every number cites a table or figure
Expression agent

Places the target in tissues and cell types — disease against healthy, RNA against protein — from internal single-cell and bulk omics and the public tissue atlas, and lists where it must not be hit.

  • RNA and protein evidence are labelled separately
  • Off-tissue expression in heart, liver, kidney and brain is always reported
Pathway biology agent

Gathers mechanism, knockdown and knockout screens and animal-model evidence, places the target in its pathway, and says whether a medicine on the same pathway has worked in the clinic.

  • Animal-only evidence is labelled
  • Single-laboratory findings are flagged
Tractability agent

Judges whether the planned modality can work — pockets, structures, ligands and hit series for small molecules; surface location and internalisation for antibodies and conjugates; knockdown and delivery for oligonucleotides.

  • Grades against the planned modality only
  • Biochemical and cellular potency reported separately
Safety liability agent

Asks what happens when the target is taken away — in loss-of-function carriers, knockout animals, essential tissues and medicines on the same pathway — and reports any human phenotype first.

  • Any human loss-of-function phenotype is flagged
  • Never lowers a liability without a cited source
  • Grade C or D routes to the safety scientist
Competition & IP agent

Maps competitor programmes by target and modality with phase and last update, checks trial registries and congress abstracts, and summarises the patent landscape with chemical similarity to your series.

  • Competitor data older than 30 days is refreshed before review
  • Never gives a legal opinion — freedom to operate goes to counsel
Critic

Challenges every section like a sceptical committee member — single-source claims, animal-only evidence, RNA without protein, stale data, wrong direction of effect — and proposes grade changes and open questions.

  • Proposes only — a person decides
  • Every challenge cites the claim it questions
Dossier assembler

Writes the templated dossier, the scorecard, the open-question list and the references, and routes the dossier to the right reviewer.

  • Only cited claims appear in the dossier
  • Uses plain words in the summary
Therapeutic-area lead

Accepts challenges and signs. The agents propose; a named person decides.

Ask in plain words

Ask about any target, grade or source

Anyone on the team can ask in plain words — or tell it what to change. Answers come from the dossiers, their cited sources and the critic’s challenges.

Why is RKN2 graded C on safety?

Because of infection risk. Two siblings with a partial loss-of-function variant had chronic mucocutaneous candidiasis from early childhood, and knock-in mice clear oral Candida more slowly. Against that, 212 heterozygous carriers show no immune deficiency across 1,400 phenotypes. The critic suggests B with a monitoring condition. That call is yours, and Lena Ortiz co-signs any C.

Which targets have a safety red flag?

Three targets have safety graded C or D: RKN2, KCNT4 and TMEM421. TMEM421 was stopped for normal-lung expression. RKN2 needs your decision: the fungal-infection signal. I have filtered the target list to these.

Compare RKN2, CDH31 and KCNT4 for the Oct 22 committee

RKN2 (B+) is strongest on genetics and biology — a protective variant with odds ratio 0.71; watch safety (C). CDH31 (B) is strongest on expression and tractability for an ADC — 74% of tumours stain; two competitors are ahead. KCNT4 (B) has genetics A from four families; safety C for cardiac conduction. I have opened them side by side.

Add a biomarkers section to the dossier template

Done. The dossier template now has a seventh section, Biomarkers & translation — patient selection, pharmacodynamic markers and translational models. The Pathway biology agent writes it and the critic checks it like any other section. New dossiers get it from today; signed dossiers are unchanged.

Every screen

The working solution, as it ships.

13 screens from the working solution, on its sample data. Pick one to see it large.

HomeThe portfolio as an evidence matrix — every target graded on six criteria — with what needs the lead today and the next committee date.
Agents at workThe planner’s research questions fan out to six specialist agents; grades land on the scorecard as each one finishes.
Dossier builtSix grades, the critic’s challenges resolved or left for the owner, and the dossier routed for review.
The dossier, section by sectionScorecard, section, key claims and their sources side by side — every claim a click from its passage.
Safety liabilitiesLoss-of-function carriers, case reports, knockout phenotypes and off-tissue expression, graded and cited.
The source passageThe exact passage a claim rests on, highlighted, with the source, journal and year.
Critic challengesWeak evidence challenged with a proposal — accept, keep as is, or ask the agent to look again.
Challenge acceptedThe grade kept, the gap turned into an open question with an owner and a due date — at sign-off, open questions become the conditions.
Sign-offThe recommendation, its conditions, open challenges and the safety co-signature, signed with the meaning recorded.
The review recordEvery request, grade, challenge, decision and signature — people and agents, newest first.
Compare for committeeUp to four targets on the same six criteria and the same rubric, with the overall grade, stage and open questions for each.
The discovery dashboardDossiers signed, days from request to a signed dossier, claims with a source, critic challenges, grades by criterion, committee decisions and where the evidence came from.
Your rulesThe dossier template — six required sections and two you can add — and the bar a grade A must clear.
Governance

Every grade earned, every claim cited, every decision signed.

No claim without its source passageEvery claim cites the table, figure or page it rests on, with the passage highlighted. Uncited claims never reach the dossier.
The critic proposes, a person decidesThe critic challenges weak evidence and proposes grade changes and open questions; it never changes a grade itself. A grade changed by a person needs a written reason.
Only the therapeutic-area lead signsAgents propose; the named lead for the therapeutic area signs, with a password and the meaning of the signature — scientific approval of this dossier — recorded together.
Safety C or D needs a second signatureAny safety grade of C or D is routed to the translational safety scientist, who co-signs after the lead.
Signed dossiers stay currentEvery week, signed dossiers are re-checked for new genetics, competitor and safety evidence. A change goes to the owner to re-grade or keep — nothing moves on its own.
Licences respected, every step on the recordLicensed content stays inside the dossier and is never exported in full. Each agent step and each human decision is on the review record, with who, what and when.
Configuration

Your rubric, your template, your signatories

How a grade is earned, how hard the critic pushes and who signs are settings, not a project.

SettingDefaultChoose from
Grade A needsTwo independent human sourcesTwo independent human sources · One human source and one functional study · Any three sources
Critic strictnessStandardStandard · Strict (also challenges every single-source claim)
Resolve every critic challenge before sign-offOff — open challenges are recorded as conditionsOn · Off
Safety C or D needs a co-signatureLena Ortiz, safety scientistAny named person on the team
Dossier templateSix required sectionsAdd Biomarkers & translation · Clinical precedent
Who signs, per therapeutic areaImmunology: Dr. Maya ChenAny named person, per area
Re-check signed dossiers for new evidenceWeeklyWeekly · Every two weeks · Monthly
Tell the owner when a grade may changeOnA notification and a Needs-you item
Connections

Reads the sources your scientists already use

Licensed literature indexarticles, full text where licensed
Public genetics and target–disease portalsgenome-wide studies, fine-mapping, tractability
Internal omicsbulk and single-cell datasets
Screening and chemistry reportshigh-throughput screens, selectivity panels, CRISPR screens
Competitor pipeline databaseprogrammes by target, modality and phase
Patent landscape servicefamilies, claims and chemical similarity
What it changes

The difference, in numbers.

Every figure is labelled: a target the solution is built to, an estimate, a typical published result, or a proven one.

target
5.1days
from request to a signed dossier, median
By hand≈ 4 weeks
With agents≈ 5 days
target
100%
of claims carry their source passage, one click away
target
65%
of the critic’s challenges accepted by reviewers before signing
Challenges accepted

“demo” = seen in the working solution, on its sample portfolio · “target” = the design goal, measured in the live solution · “estimated” = our estimate · “typical” = published figures (vendor case study on target prioritisation — about 4 weeks by hand). Background: GOT-IT target-assessment recommendations. Targets, companies and people named on this page are characters in the working solution, which is for research use and is not a GxP record.

Questions

What discovery teams ask us.

What is a target assessment dossier?

A structured case for or against pursuing a drug target in an indication. Target Dossier Builder answers six questions — genetics, expression, pathway biology, tractability, safety and competition & IP — grades each from A (strong) to D (gap or red flag), and ends with a recommendation and the open questions for the portfolio committee.

How does it grade the evidence?

Against your rubric. The dossier planner sets the evidence bar for every grade before the research starts, and the default bar for an A is two independent human sources. The critic then checks that each claim’s source supports it and that the evidence type matches the grade — RNA without protein, animal-only or single-laboratory findings are challenged.

Can we check where every claim comes from?

Yes. Every claim carries a citation, and one click opens the source passage with the sentence highlighted — the paper, table or figure, internal report or database extract. Uncited claims never reach the dossier.

Does the AI decide whether we pursue a target?

No. The agents research, grade and propose; the critic only proposes changes. The therapeutic-area lead decides each challenge and signs the dossier, and a safety grade of C or D needs the safety scientist’s co-signature. A grade changed by a person needs a written reason.

Does it work for antibodies, ADCs and oligonucleotides, not just small molecules?

Yes. Tractability is graded against the planned modality only: pockets, ligands and hit series for small molecules; surface location and internalisation for antibodies and conjugates; knockdown and delivery for oligonucleotides. The working solution carries examples of each.

How does it keep signed dossiers up to date?

A scheduled refresh re-checks signed dossiers for new genetics, competitor and safety evidence — weekly by default. When a grade may change, the owner gets a notification and decides whether to re-grade or keep it.

Which sources can the agents read?

The ones you switch on: a licensed literature index, public genetics and target–disease portals, your internal omics, screening and chemistry reports, a competitor pipeline database and a patent landscape service. Preprints are off by default and labelled “not peer reviewed” when on. Licensed content stays inside the dossier.

How long does it take to go live?

The Agentic Solution Engine builds and deploys it from your requirements — your dossier template, grading rubric, source list and signatories — and it goes live once every quality gate has passed. We will walk you through it on targets from your own portfolio first.

See it on
your targets.

We’ll run Target Dossier Builder on targets from your own portfolio.